Calculation of the relative permittivity of Rhodamine 6G using the quantum mechanical method

  • Iuliia Riabenko School of radiophysics, biomedical electronics and computer systems, V. N. Karazin Kharkiv National University, 4 Svobody Sq., Kharkiv, 61022 Ukraine; Institute of Physical Chemistry, Abbe Center of Photonics, Friedrich Schiller University Jena, Albert-Einstein-Straße 9, 07745 Germany https://orcid.org/0000-0001-8682-8009
  • Sergey Shulga School of radiophysics, biomedical electronics and computer systems, V. N. Karazin Kharkiv National University, 4 Svobody Sq., Kharkiv, 61022 Ukraine https://orcid.org/0000-0002-9392-9366
  • Konstantin Beloshenko School of radiophysics, biomedical electronics and computer systems, V. N. Karazin Kharkiv National University, 4 Svobody Sq., Kharkiv, 61022 Ukraine https://orcid.org/0000-0002-9387-3147
Keywords: DFT method, Fermi golden rule, Dirac delta function, luminescence, Rhodamine 6G, wave function

Abstract

Background: The article describes a method for calculating the permittivity of organic molecules in quantum mechanics using the well-studied Rhodamine 6G molecule as an example. The study of optical properties of large organic molecules requires not only experimental data but also the use of calculations obtained both analytically and numerically.

Objectives: Methods for calculating permittivity as phenomenological characteristics of a sample are to be tested on well-studied molecules to be further applied to more complex nonlinear structures. However, the integral changes need to be approximated in the wave functions of large molecules.

Material and methods: The numerical simulations in MATLAB were carried out to be compared with the data from Gaussian 09, which are accurate for such small molecules as Rhodamine 6G. MATLAB calculated permittivity values for the frequency domains corresponding to absorption and fluorescence based on the Fermi golden rule. Hence, any molecule can be represented as a composite quantum mechanical system. Meanwhile, Gaussian 09 used the DFT method to determine permittivity.

Results: The Fermi golden rule can be applied due to the representation of the molecule as a complex quantum mechanical system. The proposed numerical methods minimize error by using the Dirac delta function. According to our hypothesis, the sum of the wave function of a particle in a potential well and a particle in a ring equals the wave function of the entire system, thus making it possible to study large molecules. As a result of the calculation for two wavelengths of 337 and 573 nm, the permittivity results calculated using the proposed method in MATLAB are 2.98 and 6.27, respectively. Gaussian 09 calculated the same parameters at 2.85 and 6.23.

Conclusion: The resulting datasets show a high degree of correlation. Therefore, the research hypothesis has been confirmed. The selected method also proved efficient, hence the enhancement of luminescence can be achieved by changing the relaxation time of the excited state. Plasmonic nanostructures with predetermined properties will controllably enhance the resulting field by the square of the superposition modulus of their near-field. Consequently, conditions for highly coherent radiation with high intensity and polarization can be predicted and calculated before an experiment is carried out.

Downloads

Download data is not yet available.

References

Sabnis RW. Handbook of fluorescent dyes and probes: Sabnis/handbook of fluorescent dyes and probes. 1st ed. Nashville, TN: John Wiley & Sons; 2015.

Christie RM. Fluorescent dyes. Handbook of textile and industrial dyeing. 562–87; 2011.

Sauer M, Hofkens J, Enderlein J. Handbook of fluorescence spectroscopy and imaging: from ensemble to single molecules. John Wiley & Sons; 2010.

Zehentbauer FM, Moretto C, Stephen R, Thevar T, Gilchrist JR, Pokrajac D, et al. Fluorescence spectroscopy of Rhodamine 6G: concentration and solvent effects. Spectrochim Acta A Mol Biomol Spectrosc. 2014;121:147–51. http://doi.org/10.1016/j.saa.2013.10.062

Magde D, Wong R, Seybold PG. Fluorescence quantum yields and their relation to lifetimes of rhodamine 6G and fluorescein in nine solvents: improved absolute standards for quantum yields. Photochem Photobiol. 2002;75(4):327–34. http://doi.org/10.1562/0031-8655(2002)0750327fqyatr2.0.co2

Gavrilenko VI, Noginov MA. Ab initio study of optical properties of rhodamine 6G molecular dimers. J Chem Phys. 2006;124(4):044301. http://doi.org/10.1063/1.2158987

Chapman M, Euler WB. Rhodamine 6G structural changes in water/ethanol mixed solvent. J Fluores. 2018;28(6):1431–7. http://doi.org/10.1007/s10895-018-2318-0

On C, Tanyi EK, Harrison E, Noginov MA. Effect of molecular concentration on spectroscopic properties of poly(methyl methacrylate) thin films doped with rhodamine 6G dye. Opt Mater Express. 2017;7(12):4286. http://doi.org/10.1364/ome.7.004286

Novoa-Ortega E, Dubnicka M, Euler WB. Structure-Property Relationships on the Optical Properties of Rhodamine Thin Films. J Phys Chem C. 2020;124(29):16058–68. http://doi.org/10.1021/acs.jpcc.0c05139

Mullen M, Euler WB. The influence of interfacial effects on the photophysics of rhodamine 6G thin films on a poly(vinylidene fluoride) surface. Langmuir. 2017;33(9):2194–204. http://doi.org/10.1021/acs.langmuir.7b00144

Liu W-L, Bassett WP, Christensen JM, Dlott DD. Emission lifetimes of a fluorescent dye under shock compression. J Phys Chem A. 2015;119(44):10910–6. http://doi.org/10.1021/acs.jpca.5b09695

Popov P, Steinkerchner L, Mann EK. Molecular dynamics study of rhodamine 6G diffusion at n-decane–water interfaces. Physical Review E. 2015;91(5):053308. https://doi.org/10.1103/PhysRevE.91.053308

Brown KE, Fu Y, Shaw WL, Dlott DD. Time-resolved emission of dye probes in a shock-compressed polymer. J Appl Phys. 2012;112(10):103508. http://doi.org/10.1063/1.4765687

Curtis AD, Banishev AA, Shaw WL, Dlott DD. Laser-driven flyer plates for shock compression science: launch and target impact probed by photon Doppler velocimetry. Rev Sci Instrum. 2014;85(4):043908. http://doi.org/10.1063/1.4871361

Watanabe H. Hayazawa N, Inouye Y, Kawata S, DFT vibrational calculations of rhodamine 6G adsorbed on silver: analysis of tip-enhanced Raman spectroscopy. The Journal of Physical Chemistry B. 2005;109(11):5012–5020. https://doi.org/10.1021/jp045771u

Zhou P. Why the lowest electronic excitations of rhodamines are overestimated by time‐dependent density functional theory. International Journal of Quantum Chemistry. 2018; 118(23): e25780. https://doi.org/10.1002/qua.25780

Lower SK, El-Sayed MA. The triplet state and molecular electronic processes in organic molecules. Chemical Reviews 1966; 66(2): 199-241. https://doi.org/10.1021/cr60240a004

Pastore M, Fantacci S, De Angelis F. Modeling excited states and alignment of energy levels in dye-sensitized solar cells: successes, failures, and challenges. The Journal of Physical Chemistry C. 2013;117(8):3685-3700. https://doi.org/10.1021/jp3095227

Slanina T, Oberschmid T. Rhodamine 6g radical: A spectro (fluoro) electrochemical and transient spectroscopic study. ChemCatChem. 2018;10(18):4182–4190. https://doi.org/10.1002/cctc.201800971

Venkateswarlu P, George MC, Rao YV, Jagannath H, Chakrapani G, Miahnahri A. Transient excited singlet state absorption in Rhodamine 6G. Pramana. 1987;28:59–71. https://doi.org/10.1007/BF02846809

Jian W, Beloshenko KS, Makarovskiy M, Riabenko I, Shulga S, Prokhorenko S Resonance light absorption of granular aluminium and silver films placed on a rough sublayer of multilayered ZnS. Ukrainian journal of physical optics. 2019;(20):10–15. https://doi.org/10.3116/16091833/20/1/10/2019

Zheng Y, Beloshenko KS, Makarovskiy M, Guliyova Y, Shulga S, Wojnarowska R, et al. Study of plasma frequency for Al-In alloys with different concentrations. Ukrainian journal of physical optics. 2017;(18):225–231. https://doi.org/10.3116/16091833/18/4/225/2017

Fabian J, Hartmann H. Light absorption of organic colorants: theoretical treatment and empirical rules. Berlin‐Heidelberg‐New York: Springer‐Verlag. 1980. https://doi.org/10.1002/prac.19823240223

Berger R. Computational chemistry. Introduction to the theory and applications of molecular and quantum mechanics. By Errol G. lewars. Angew Chem Int Ed Engl. 2004;43(38):4979–80. http://doi.org/10.1002/anie.200485057

Nagakura, S., & Baba, H. Dipole moments and near ultraviolet absorption of some monosubstituted benzenes—The effect of solvents and hydrogen bonding. Journal of the American Chemical Society. 1952;74(22):5693-5698. https://doi.org/10.1021/ja01142a040

Afsar MN, Birch JR, Clarke RN, Chantry GW. The measurement of the properties of materials. Proceedings of the IEEE, 1986;74(1):183-199. https://doi.org/10.1109/PROC.1986.13432

Landau LD, Lifshitz EM, Pitaevskii LP. Electrodynamics of continuous media. 2nd ed. Oxford, England: Butterworth-Heinemann; 1984.

Engerholm GG, Luntz AC, Gwinn WD, Harris DO. Ring Puckering in Five‐Membered Rings. II. The Microwave Spectrum, Dipole Moment, and Barrier to Pseudorotation in Tetrahydrofuran. The Journal of Chemical Physics. 1969;50(6):2446-2457. https://doi.org/10.1063/1.1671401

Braak D, Mannhart J. Fermi’s golden rule and the second law of thermodynamics. Foundations of Physics, 2020;50(11): 1509-1540. https://doi.org/10.1007/s10701-020-00380-2

Adler SL. Quantum theory of the dielectric constant in real solids. Physical Review. 1962;126(2):413. https://doi.org/10.1103/PhysRev.126.413

Norambuena A, Tancara D, Coto R. Coding closed and open quantum systems in MATLAB: applications in quantum optics and condensed matter. European Journal of Physics, 2020 ;41(4): 045404. https://doi.org/10.1088/1361-6404/ab8360

Frisch MJ, Trucks GW, Schlegel HB, Scuseria GE, Robb MA, Cheeseman JR, et al. Gaussian 09, Revision D. 01, Gaussian, Inc., Wallingford CT [Internet]. [cited 2009] Available from: http://www.gaussian.com

Hoffmann, Roald. How chemistry and physics meet in the solid state. Angewandte Chemie International Edition in English 1987; 26(9): 846-878. https://doi.org/10.1002/anie.198708461

Shimomura O, Yampolsky I. Bioluminescence: Chemical principles and methods (third edition): Chemical Principles and Methods. Shimomura O, Yampolsky IV, editors, Singapore: World Scientific Publishing; 2019.

Kubo R, Toyozawa Y. Application of the method of generating function to radiative and non-radiative transitions of a trapped electron in a crystal. Progress of Theoretical Physics. 1955;13(2):160-182. https://doi.org/10.1143/PTP.13.160

Demtröder W. Laser spectroscopy: Vol. 2: Experimental techniques. 4th ed. Berlin, Germany: Springer; 2008.

Ageev LA, Miloslavsky VK, Elshhab HI, Blokha VB. Educational experiments and demonstrations in optics. Kharkiv: KhNU; 2000. 176–178 p. (In Russian).

Ejuh, GW, Abe MO, Nya FT, Ndjaka JMB. Prediction of electronic structure, dielectric and thermodynamical properties of flurbiprofen by density functional theory calculation. Karbala International Journal of Modern Science. 2018;4(1):12-20. https://doi.org/10.1016/j.kijoms.2017.10.001

Tang Z, Chang C, Bao F, Tian L, Liu H, Wang M, Zhu C, Xu J. Feasibility of Predicting Static Dielectric Constants of Polymer Materials: A Density Functional Theory Method. Polymers. 2021;13(2):284. https://doi.org/10.3390/polym13020284

Kreibig U, Vollmer M. Optical properties of metal clusters. 1995th ed. Berlin, Germany: Springer; 2013.

RCWA Solver Introduction – Ansys Optics [Internet]. [cited 2019, updated 2023] Available from: https://optics.ansys.com/hc/en-us/articles/4414575008787-RCWA-Solver-Introduction

Kitazawa T, Kitahara R, Yamagiwa T, Chakarothai J, Y. Hayashi and T. Kasuga. Basic Study on a Novel FDTD Method Implemented Frequecy Dispersion of PCB. 2021 IEEE International Joint EMC/SI/PI and EMC Europe Symposium, Raleigh. North Carolina, USA; 2021. p.580. https://doi.org/10.1109/EMC/SI/PI/EMCEurope52599.2021.9559370

Muller JM, Brunie N, Dinechin F, Jeannerod CP, Joldes M, Lefèvre V, et al. Handbook of floating-point arithmetic. Basel, Switzerland. Birkhäuser; 2018

Lax PD. Gibbs Phenomena. J Sci Comput 2006;28:445–449. https://doi.org/10.1007/s10915-006-9075-y

Published
2023-12-19
Cited
How to Cite
Riabenko, I., Shulga, S., & Beloshenko, K. (2023). Calculation of the relative permittivity of Rhodamine 6G using the quantum mechanical method. Biophysical Bulletin, (50), 7-16. https://doi.org/10.26565/2075-3810-2023-50-01
Section
Molecular biophysics